Design of computational retrobiosynthesis tools for the design of de novo synthetic pathways
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Living organisms can catalyze many thousands of biochemical reactions that they use to convert energy and matter, which provides them with the essentials for life. The sum of these chemical reactions happening in an organism is called metabo-lism. Understa ...
Ivan Illich's research has accurately described the changing relationship between the experience of reading and the experience of the body. He sees the screen as a new tool for reading and begins to consider research hypotheses about this transformation. T ...
Bioluminescent imaging is a powerful technique that enables imaging in living organisms with high sensitivity, low background signal, low cost and without the need for radioactivity. The emitted photons are produced in the oxidation reaction of luciferin c ...
Existing connectivity-oriented performance measures rank road delineation algorithms inconsistently, which makes it difficult to decide which one is best for a given application. We show that these inconsistencies stem from design flaws that make the metri ...
Neuroscience incorporates knowledge from a range of scales, from single molecules to brain wide neural networks. Modeling is a valuable tool in understanding processes at a single scale or the interactions between two adjacent scales and researchers use a ...
In this paper, we will present an update for the previously developed CCFatigue computational tool. This tool has been built around several analysis methods for fatigue life predictions of composite materials and includes modules that allow analysis over c ...
Native reactive electrophilic species (RES) are long-recognized regulators of pathophysiology; yet, knowledge surrounding how RES regulate context-specific biology remains limited. The latest technological advances in profiling and precision decoding of RE ...
Automating experimental procedures has resulted in an unprecedented increase in the volume of generated data, which, in turn, has caused an accumulation of unprocessed data. As a result, the need to develop tools to analyze data systematically has been ris ...
The metabolic engineering community relies on computational methods for pathway design to produce important small molecules in microbial hosts. Metabolic network databases are continuously curated and updated with known and novel reactions that expand the ...
Over the last decades, yeast has become a key model organism for the study of lipid biochemistry. Because the regulation of lipids has been closely linked to various physiopathologies, the study of these biomolecules could lead to new diagnostics and treat ...