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Subtilin Production by Bacillus Subtilis: Stochastic Hybrid Models and Parameter Identification

Related publications (35)

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A higher-order numerical framework for stochastic simulation of chemical reaction systems

Background: In this paper, we present a framework for improving the accuracy of fixed-step methods for Monte Carlo simulation of discrete stochastic chemical kinetics. Stochasticity is ubiquitous in many areas of cell biology, for example in gene regulatio ...

Biomed Central Ltd2012

EM SIMULATIONS IN BEAM COUPLING IMPEDANCE STUDIES: SOME EXAMPLES OF APPLICATION

Carlo Zannini, Giovanni Rumolo

In the frame of the SPS upgrade an accurate impedance model is needed in order to predict the instability threshold and if necessary to start a campaign of impedance reduction. Analytical models, 3-D simulations and bench measurements are used to estimate ...

2012

Locality and universality in gyrokinetic turbulence

Laurent Villard, Stephan Brunner

The nature of nonlinear interactions in gyrokinetic (GK) turbulence, driven by the ion-temperature gradient instability, is investigated using direct numerical simulations in toroidal flux tube geometry. To account for the level of separation existing betw ...

American Physical Society2012

Modelling of Physiological Flows

This book offers a mathematical update of the state of the art of the research in the field of mathematical and numerical models of the circulatory system. It is structured into different chapters, written by outstanding experts in the field. Many fundamen ...

Springer2011

Realistic Modeling of 3D Plasmonic Systems

Andreas Kern

Interest in plasmonic nanostructures has recently multiplied due to their extraordinary optical properties. When resonantly excited, these tiny metallic systems exhibit a strong and localized optical field enhancement. Applications exploiting this effect e ...

EPFL2011

Hydrodynamics of a Pump-Turbine at Off-Design Operating Conditions: Numerical Simulation

François Avellan, Mohamed Farhat, Vlad Hasmatuchi, Steven Roth, Francisco Botero

Flow numerical simulations in a low specific speed radial pump-turbine scale model are performed to investigate off-design operating conditions in generating mode. The Best Efficiency Point (BEP) and the runaway operating conditions at 10° guide vanes open ...

2011

High-speed power system stability simulation using analog computation: Systematic error analysis

Maher Kayal, Laurent Fabre, Ira Nagel

This paper joins a series of papers dealing with high-speed power system emulators. It clarifies the last details about the system level of the AC emulation approach by analyzing and quantifying the systematic errors introduced during modeling. Thereby a n ...

2010

Cardiovascular Mathematics

Alfio Quarteroni, Luca Formaggia

Cardiovascular diseases have a major impact in Western countries. Mathematical models and numerical simulations can help the understanding of physiological and pathological processes, complementing the information provided to medical doctors by medical ima ...

Springer2009

Scientific Computing For Aluminum Production

Jacques Rappaz, Marco Picasso, Gilles Steiner, Thomas Hofer

Numerical simulation in aluminum production envolves many different topics, this paper is dedicated to some aspects of two of them. In the first part, a numerical approach for the computation of the motion of the fluids in an electrolitic cell is presented ...

2009

GaN-based embedded 2D photonic crystal LEDs: Numerical optimization and device characterization

Elison de Nazareth Matioli

We present the numerical optimization of GaN-based embedded 2D-Photonic Crystal (PhC) LEDs based on a full 3D scattering matrix model pointing out the importance of a proper vertical design in embedded PhC structures. The growth of such structures followin ...

Wiley-V C H Verlag Gmbh2009