MutationIn biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA or viral replication, mitosis, or meiosis or other types of damage to DNA (such as pyrimidine dimers caused by exposure to ultraviolet radiation), which then may undergo error-prone repair (especially microhomology-mediated end joining), cause an error during other forms of repair, or cause an error during replication (translesion synthesis).
RING finger domainIn molecular biology, a RING (short for Really Interesting New Gene) finger domain is a protein structural domain of zinc finger type which contains a C3HC4 amino acid motif which binds two zinc cations (seven cysteines and one histidine arranged non-consecutively). This protein domain contains 40 to 60 amino acids. Many proteins containing a RING finger play a key role in the ubiquitination pathway.
Integral domainIn mathematics, specifically abstract algebra, an integral domain is a nonzero commutative ring in which the product of any two nonzero elements is nonzero. Integral domains are generalizations of the ring of integers and provide a natural setting for studying divisibility. In an integral domain, every nonzero element a has the cancellation property, that is, if a ≠ 0, an equality ab = ac implies b = c. "Integral domain" is defined almost universally as above, but there is some variation.
UbiquitinUbiquitin is a small (8.6 kDa) regulatory protein found in most tissues of eukaryotic organisms, i.e., it is found ubiquitously. It was discovered in 1975 by Gideon Goldstein and further characterized throughout the late 1970s and 1980s. Four genes in the human genome code for ubiquitin: UBB, UBC, UBA52 and RPS27A. The addition of ubiquitin to a substrate protein is called ubiquitylation (or, alternatively, ubiquitination or ubiquitinylation).
Dedekind domainIn abstract algebra, a Dedekind domain or Dedekind ring, named after Richard Dedekind, is an integral domain in which every nonzero proper ideal factors into a product of prime ideals. It can be shown that such a factorization is then necessarily unique up to the order of the factors. There are at least three other characterizations of Dedekind domains that are sometimes taken as the definition: see below. A field is a commutative ring in which there are no nontrivial proper ideals, so that any field is a Dedekind domain, however in a rather vacuous way.
Mutation rateIn genetics, the mutation rate is the frequency of new mutations in a single gene or organism over time. Mutation rates are not constant and are not limited to a single type of mutation; there are many different types of mutations. Mutation rates are given for specific classes of mutations. Point mutations are a class of mutations which are changes to a single base. Missense and Nonsense mutations are two subtypes of point mutations.
Prüfer domainIn mathematics, a Prüfer domain is a type of commutative ring that generalizes Dedekind domains in a non-Noetherian context. These rings possess the nice ideal and module theoretic properties of Dedekind domains, but usually only for finitely generated modules. Prüfer domains are named after the German mathematician Heinz Prüfer. The ring of entire functions on the open complex plane form a Prüfer domain. The ring of integer valued polynomials with rational coefficients is a Prüfer domain, although the ring of integer polynomials is not .
Ubiquitin ligaseA ubiquitin ligase (also called an E3 ubiquitin ligase) is a protein that recruits an E2 ubiquitin-conjugating enzyme that has been loaded with ubiquitin, recognizes a protein substrate, and assists or directly catalyzes the transfer of ubiquitin from the E2 to the protein substrate. In simple and more general terms, the ligase enables movement of ubiquitin from a ubiquitin carrier to another thing (the substrate) by some mechanism. The ubiquitin, once it reaches its destination, ends up being attached by an isopeptide bond to a lysine residue, which is part of the target protein.
Unique factorization domainIn mathematics, a unique factorization domain (UFD) (also sometimes called a factorial ring following the terminology of Bourbaki) is a ring in which a statement analogous to the fundamental theorem of arithmetic holds. Specifically, a UFD is an integral domain (a nontrivial commutative ring in which the product of any two non-zero elements is non-zero) in which every non-zero non-unit element can be written as a product of prime elements (or irreducible elements), uniquely up to order and units.
Frameshift mutationA frameshift mutation (also called a framing error or a reading frame shift) is a genetic mutation caused by indels (insertions or deletions) of a number of nucleotides in a DNA sequence that is not divisible by three. Due to the triplet nature of gene expression by codons, the insertion or deletion can change the reading frame (the grouping of the codons), resulting in a completely different translation from the original. The earlier in the sequence the deletion or insertion occurs, the more altered the protein.
