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Wannier90 as a community code: new features and applications

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Precise and accurate measurements of the stable isotope composition from precipitation, land ice, runoff, and oceans provide critical information on Earth's water cycle. The analysis, post-processing, and calibration of raw analytical signals from laser sp ...

2023

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Supplementary files containing datasets needed to reproduce the results of the manuscript "Generative machine learning produces kinetic models that accurately characterize intracellular metabolic states" by S. Choudhury et al (https://doi.org/10.1101/2023. ...

EPFL Infoscience2023

STEPS 4.0: Fast and memory-efficient molecular simulations of neurons at the nanoscale

James Gonzalo King, Pramod Shivaji Kumbhar, Iain Hepburn, Weiliang Chen, Tristan Mathieu Carel, Alessandro Cattabiani, Nicola Cantarutti, Omar Awile, Christos Kotsalos, Samuel Marie A Melchior, Baudouin Paul Michel Maria Joseph Del Marmol, Giacomo Castiglioni

Recent advances in computational neuroscience have demonstrated the usefulness and importance of stochastic, spatial reaction-diffusion simulations. However, ever increasing model complexity renders traditional serial solvers, as well as naive parallel imp ...

FRONTIERS MEDIA SA2022

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We introduce HP, an implementation of density-functional perturbation theory, designed to compute Hubbard parameters (on-site U and inter-site V ) in the framework of DFT+U and DFT+U+V. The code does not require the use of computationally expensive superce ...

ELSEVIER2022

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Peer code review has proven to be a valuable tool in software engineering. However, integrating code reviews into educational contexts is particularly challenging due to the complexity of both the process and popular code review tools. We propose to addres ...

IEEE2022

Evaluating earthquake-induced losses, such as structural repair costs, downtime and casualties, is becoming a standard practice within the performance-based earthquake engineering framework. Nonetheless, this evaluation is a demanding task that requires de ...

2021

Fuzzing is a testing technique to discover unknown vulnerabilities in software. When applying fuzzing to libraries, the core idea of supplying random input remains unchanged, yet it is non-trivial to achieve good code coverage. Libraries cannot run as stan ...

USENIX ASSOC2020

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It has often been found that students appreciate hands-on work, and find that they learn more with courses that include a project than those relying solely on conventional lectures and tests. This type of project driven learning is a key component of “Inqu ...

2019

Open Source Tools for Biological Image Analysis

Olivier Burri, Arne Seitz, Romain Guiet

Visiting the Bio Imaging Search Engine (BISE) (Bio, BISE, Engine, http://biii.eu/, Imaging, Search) website at the time of writing this article, almost 1200 open source assets (components, workflows, collections) were found. This overwhelming range of offe ...

Humana Press2019

Food Action: A Pilot Program for more Sustainable Food Habits

Food is a critical global resource that impacts all 17 of the UN Sustainable Development Goals, and a huge contributor to both problems (climate, environment, health) and solutions. The Food Action project engaged 5 countries in developing and testing a pr ...

Paul Scherrer Institute, World Resources Forum2019