Mask Combination of Multi-Layer Graphs for Global Structure Inference

Structure inference is an important task for network data processing and analysis in data science. In recent years, quite a few approaches have been developed to learn the graph structure underlying a set of observations captured in a data space. Although real-world data is often acquired in settings where relationships are influenced by a priori known rules, such domain knowledge is still not well exploited in structure inference problems. In this paper, we identify the structure of signals defined in a data space whose inner relationships are encoded by multi-layer graphs. We aim at properly exploiting the information originating from each layer to infer the global structure underlying the signals. We thus present a novel method for combining the multiple graphs into a global graph using mask matrices, which are estimated through an optimization problem that accommodates the multi-layer graph information and a signal representation model. The proposed mask combination method also estimates the contribution of each graph layer in the structure of signals. The experiments conducted both on synthetic and real-world data suggest that integrating the multi-layer graph representation of the data in the structure inference framework enhances the learning procedure considerably by adapting to the quality and the quantity of the input data.

Representation Learning for Multi-relational Data

Eda Bayram

Recent years have witnessed a rise in real-world data captured with rich structural information that can be better depicted by multi-relational or heterogeneous graphs.However, research on relational representation learning has so far mostly focused on the problems arising in simple, homogeneous graphs. Integrating the structural priors provided by multi-relational data may further empower the generalization capacity of representation learning models, yet it still remains an open challenge.Although there is a strong line of works on relational machine learning on knowledge graphs, it is quite concentrated on the task ofcompleting missing edges, which is known as link prediction. In this thesis, we shift the focus away from the well-addressed node and graph classification problems on simple graphs or the link prediction problem on knowledge graphs, and prompt new research questions targeting the representation learning problems that are overlooked in multi-relational data.First, we focus on the problem of node regression on multi-relational graphs, noting that inference of continuous node features across a graph is rather under-studied in the current relational learning research.We propose a novel propagation method which aims to complete missing features at the nodes of a multi-relational and directed graph.Our multi-relational propagation algorithm is composed of iterative neighborhood aggregations which originate from a relational local generative model. Our findings show the benefit of exploiting the inductive bias led by the multi-relational structure of the data.Next, we consider the node attribute completion problem in knowledge graphs, which is relatively unexplored by the knowledge graph reasoning literature.We propose a novel multi-relational attribute propagation method where we harness not only the relational structure of the knowledge graph, but also the dependencies between various types of numerical node attributes relying on a heterogeneous feature space.Our algorithm is framed within a message-passing scheme where the propagation parameters are estimated in advance. We also propose an alternative semi-supervised learning framework where the parameters and the missing node attributes are inferred in an end-to-end fashion.Experimental results on well-known knowledge graph datasets relay the effectiveness of our message-passing approach, which specifies the computational graph by the heterogeneity of the data.Finally, we study graph learning in multi-relational data domain.Unlike the existing structure inference methods, we aim at exploiting and combining each source of relational information provided by the data domain to learn the underlying graph of a set of observations.For this purpose, we employ a multi-layer graph representation which encodes multiple types of relationships between data entities. Then, we propose a mask learning method to infer a specific combination of the layers which reveals the structure of observations.Experiments conducted both on simulated and real-world data suggest that incorporating multi-relational domain knowledge enhances structure inference by boosting its adaptability to a variety of input data conditions.

EPFL2021

Rate allocation and optimized decoding in inter-session network coding

Eirina Bourtsoulatze

Recent advances in data processing and communication systems have led to a continuous increase in the amount of data communicated over today’s networks. These large volumes of data pose new challenges on the current networking infrastructure that only offers a best effort mechanism for data delivery. The emergence of new distributed network architectures, such as peer-to-peer networks and wireless mesh networks, and the need for efficient data delivery mechanisms have motivated researchers to reconsider the way that information is communicated and processed in the networks. This has given rise to a new research field called network coding. The network coding paradigm departs from the traditional routing principle where information is simply relayed by the network nodes towards the destination, and introduces some intelligence in the network through coding at the intermediate nodes. This in-network data processing has been proved to substantially improve the performance of data delivery systems in terms of throughput and error resilience in networks with high path diversity. Motivated by the promising results in the network coding research, we focus in this thesis on the design of network coding algorithms for simultaneous transmission of multiple data sources in overlay networks. We investigate several problems that arise in the context of inter-session network coding, namely (i) decoding delay minimization in inter-session network coding, (ii) distributed rate allocation for inter-session network coding and (iii) correlation-aware decoding of incomplete network coded data. We start by proposing a novel framework for data delivery from multiple sources to multiple clients in an overlay wireline network, where intermediate nodes employ randomized inter-session network coding. We consider networks with high resource diversity, which creates network coding opportunities with possibly large gains in terms of throughput, delay and error robustness. However, the coding operations in the intermediate nodes must be carefully designed in order to enable efficient data delivery. We look at the problem from the decoding delay perspective and design solutions that lead to a small decoding delay at clients through proper coding and rate allocation. We cast the optimization problem as a rate allocation problem, which seeks for the coding operations that minimize the average decoding delay in the client population. We demonstrate the validity of our algorithm through simulations in representative network topologies. The results show that an effective combination of intra- and inter-session network coding based on randomized linear coding permits to reach small decoding delays and to better exploit the available network resources even in challenging network settings. Next, we design a distributed rate allocation algorithm where the users decide locally how many intra- and inter-session network coded packets should be requested from the parent nodes in order to get minimal decoding delay. The capability to take coding decisions locally with only a partial knowledge of the network statistics is of crucial importance for applications where users are organized in dynamic overlay networks. We propose a receiver-driven communication protocol that operates in two rounds. First, the users request and obtain information regarding the network conditions and packet availability in their local neighborhood. Then, every user independently optimizes the rate allocation among different possible intra- and inter-session packet combinations to be requested from its parents. We also introduce the novel concept of equivalent flows, which permits to efficiently estimate the expected number of packets that are necessary for decoding and hence to simplify the rate allocation process. Experimental results indicate that our algorithm is capable of eliminating the bottlenecks and reducing the decoding delay of users with limited resources. We further investigate the application of the proposed distributed rate allocation algorithm to the transmission of video sequences and validate the performance of our system using the NS-3 simulator. The simulation results show that the proposed rate allocation algorithm is successful in improving the quality of the delivered video compared to intra-session network coding based solutions. Finally, we investigate the problem of decoding the source information from an incomplete set of network coded data with the help of source priors in a finite algebraic field. The inability to form a complete decoding system can be often caused by transmission losses or timing constraints imposed by the application. In this case, exact reconstruction of the source data by conventional algorithms such as Gaussian elimination is not feasible; however, partial recovery of the source data may still be possible, which can be useful in applications where approximate reconstruction is informative. We use the statistical characteristics of the source data in order to perform approximate decoding. We first analyze the performance of a hypothetical maximum a posteriori decoder, which recovers the source data from an incomplete set of network coded data given the joint statistics of the sources. We derive an upper bound on the probability of erroneous source sequence decoding as a function of the system parameters. We then propose a constructive solution to the approximate decoding problem and design an iterative decoding algorithm based on message passing, which jointly considers the network coding and the correlation constraints. We illustrate the performance of our decoding algorithm through extensive simulations on synthetic and real data sets. The results demonstrate that, even by using a simple correlation model expressed as a correlation noise between pairs of sources, the original source data can be partially decoded in practice from an incomplete set of network coded symbols. Overall, this thesis addresses several important issues related to the design of efficient data delivery methods with inter-session network coding. Our novel framework for decoding delay minimization can impact the development of practical inter-session network coding algorithms that are appropriate for applications with low delay requirements. Our rate allocation algorithms are able to exploit the high resource diversity of modern networking systems and represent an effective alternative in the development of distributed communication systems. Finally, our algorithm for data recovery from incomplete network coded data using correlation priors can contribute significantly to the improvement of the delivered data quality and provide new insights towards the design of joint source and network coding algorithms.

EPFL2013

Signal structure: from manifolds to molecules and structured sparsity

Sofia Karygianni

Effective representation methods and proper signal priors are crucial in most signal processing applications. In this thesis we focus on different structured models and we design appropriate schemes that allow the discovery of low dimensional latent structures that characterise and identify the signals. Motivated by the highly non-linear structure of most datasets, we firstly investigate the geometry of manifolds. Manifolds are low dimensional, non-linear structures that are naturally employed to describe sets of strongly related signals such as the images of a 3-D object captured from different viewpoints. However, the use of manifolds in applications is not straightforward due to their usually non-analytic and non-linear form. We propose here a way to `disassemble' a manifold into simpler components by approximating it with affine subspaces. Our objective is to discover a set of low dimensional affine subspaces that can represent manifold data accurately while preserving the manifold's structure. To this end, we employ a greedy technique that iteratively merges manifold samples into groups based on the difference of local tangents. We use our algorithm to approximate synthetic and real manifolds and to demonstrate that it is competitive to state-of-the-art techniques. Then, we consider structured sparse representations of signals and we propose a new sparsity model, where signals are essentially composed of a small number of structured {\it molecules }. We define the molecules to be linear combinations of a small number of atoms in a redundant dictionary. Our multi-level model takes into account the energy distribution of the significant signal components in addition to their support. It permits to define typical visual patterns and recognise them in prototypical or deformed form. We define a new structural difference measure between molecules and their deformed versions, which is based on their sparse codes and we create an algorithm for decomposing signals into molecules that can account for different deviations in the internal molecule structure. Our experiments verify the benefits of the new image model in various restoration tasks and they confirm that the development of proper models that extend the mere notion of sparsity can be very useful for various inverse problems in imaging. Finally, we investigate the problem of learning molecule representations directly in the sparse code domain. We constrain sparse codes to be linear combinations of a few, possibly deformed, molecules and we design an algorithm that can learn the structure from the codes without transforming them back into the signal domain. To this end, we take advantage of our structural difference which is based on the sparse codes and we devise a scheme for representing the codes with molecules and learn the molecules at the same time. To illustrate the effectiveness of our proposed algorithm we apply it to various synthetic and real datasets and we compare the results with traditional sparse coding and dictionary learning techniques. From the experiments, we verify the superior performance of our scheme in interpreting and recognising correctly the underlying structure. In short, in this thesis we are interested in low-dimensional, structured models. Among the various choices, we focus on manifolds and sparse representations and we propose schemes that enhance their structural properties and highlight their effectiveness in signal representations.

EPFL2015